Promoter Databases
Core promoter
http://rulai.cshl.org/tools/genefinder/CPROMOTER/index.htm
CpG promoter
http://rulai.cshl.org/tools/CpG_promoter/
dbtss
http://dbtss.hgc.jp/index.html
FirstEF
http://rulai.cshl.org/tools/FirstEF/
Neural Network Promoter Prediction
http://www.fruitfly.org/seq_tools/promoter.html
ProGA
http://wwwmgs.bionet.nsc.ru/mgs/programs/proga/
Promoter 2.0 Prediction Server
http://www.cbs.dtu.dk/services/Promoter/
Promoter Binding Element Database
http://exon.cshl.org/cgi-bin/atprobe/atprobe.pl
ScanACE & AlignACE
http://arep.med.harvard.edu/mrnadata/mrnasoft.html
Tfsitescan
http://www.ifti.org/cgi-bin/ifti/Tfsitescan.pl
TSSG
http://www.softberry.com/berry.phtml?topic=tssg&group=help&subgroup=promoter
TSSG/W
http://www.softberry.com/berry.phtml?topic=tssw&group=programs&subgroup=promoter